Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., Deoxyribodipyrimidine photolyase from Kangiella aquimarina DSM 16071

 Score =  532 bits (1370), Expect = e-155
 Identities = 264/488 (54%), Positives = 325/488 (66%), Gaps = 7/488 (1%)

Query: 1   MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQ 60
           M  IN+VWLKRDLRLTDH PLQ A     P +LLY+FEP LL D HYS RHWRFVWQSL 
Sbjct: 1   MSGINIVWLKRDLRLTDHEPLQLACDRPEPFILLYIFEPSLLSDPHYSTRHWRFVWQSLC 60

Query: 61  AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ 120
            I + L    G ++I   +       I     I  I+S+QEVG+  TF RD+ + +WC+ 
Sbjct: 61  DIEQKLKPYGGRLVITQGEALDTLEAIRNVTNITTIFSYQEVGINRTFDRDIKVKRWCEN 120

Query: 121 HDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGLRSDIP 180
           H I W E  Y AVIRGA+ RK WD HW+QVMR+P   P+L +A W +     L L     
Sbjct: 121 HQIQWRESSYGAVIRGARHRKQWDAHWKQVMRAPLAQPNLKKAIWYE---GKLNLPPVDS 177

Query: 181 ATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLARHACSRMSPYLAWGNIS 240
             W+      QTGG  +A   LEDFF +RG+ Y + IS P  +R+ CSR+SPYLAWGN+S
Sbjct: 178 HRWEKPNPQFQTGGMTVAKQVLEDFFDQRGKSYSKYISKPLASRNHCSRLSPYLAWGNLS 237

Query: 241 LREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS 300
           LRE YQ LL +W+  G+RRSL ALSSRLHWHCHFIQKFESE ++E R +N AY     + 
Sbjct: 238 LRETYQELLANWNRTGWRRSLSALSSRLHWHCHFIQKFESETDIEHRPMNIAYLDFPYRY 297

Query: 301 SDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTY 360
            D       AW+ G TG PLVDACMRCL +TGY+NFRMRAMLVS   HH+ +DWR    Y
Sbjct: 298 DDTAKQDYLAWRKGETGYPLVDACMRCLRETGYINFRMRAMLVSFACHHLLLDWRWISHY 357

Query: 361 LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPV 420
           LAQLFLDFEPGIHYPQ QMQAGVTG NTIRIYNPTKQAQEHD +G+FI +W PEL  +P 
Sbjct: 358 LAQLFLDFEPGIHYPQIQMQAGVTGINTIRIYNPTKQAQEHDPDGEFIKQWCPELRGLPT 417

Query: 421 PLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRIL 480
            ++  PW M+PLE Q+  +     Y  P++++  S K+AR+ LW ++K  +V+ EA RIL
Sbjct: 418 EIIHTPWEMSPLEKQLNPI----TYPDPIVEISESGKRARELLWSFRKHNSVKQEASRIL 473

Query: 481 ARHVRQAK 488
             HVR +K
Sbjct: 474 QTHVRPSK 481