Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dianthicola ME23

 Score =  116 bits (290), Expect = 2e-30
 Identities = 129/491 (26%), Positives = 204/491 (41%), Gaps = 65/491 (13%)

Query: 5   NLVWLKRDLRLTDHAPLQAALTSGRPTL-LLYLFEPMLLGDAHYSERHWRFVWQSLQAIN 63
           +LVW + DLRLTD+  L AA       +  +++  P        +     F+  +L+ + 
Sbjct: 4   HLVWFRHDLRLTDNLALHAACQDPDARVEAVFIATPQQWASHAMAPCQAAFLLDNLRCLQ 63

Query: 64  RDLAQS-------KGEVLIVTSDWQTCFARIAERYAIEAIYSHQ----EVGLACTFQRDL 112
           + L +        + +    +  W   F R  ER A    Y+ Q    E       ++ L
Sbjct: 64  QALGEKGIPLHYRQCDDFAASVRWLADFCR--ERQATHLFYNRQYEWNERQRDRQLEQAL 121

Query: 113 ALAQWCQQHDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMR-----------SPCC--DPD 159
           A    C+  D      P + V       K +       ++           +P      D
Sbjct: 122 AGVSECRGFDDSLLLPPGSVVTGSGDMYKVFTPFRTAFLKCLQQRDVASVPTPAARRQGD 181

Query: 160 LTRANWLKLDAATLGLRSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISS 219
           +T A+    D     + +D PA            G   A   L  F   +   Y+     
Sbjct: 182 ITLASLAPFDYPQTDVHADFPA------------GEPAALQRLRQFCREQVMLYHEQREL 229

Query: 220 PSLARHACSRMSPYLAWGNISLREMYQTL-LKH--WSVAGFRRSLIALSSRLHWHCHFIQ 276
           P+LA  A S++SPYLA G +S R+ +  L ++H  W +A          + L W   +  
Sbjct: 230 PALA--ATSKLSPYLALGILSPRQCFNRLRMEHPDW-LARSDSGAFTWFNELVWREFYRH 286

Query: 277 KFESECEMEFRCVNRAYDSLLQQSS--DAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYL 334
                  +   C ++ +    ++ +  +AP  +LAAWQ G TG P+VDA MR L QTG++
Sbjct: 287 LLVFSPTL---CKHQPFIGWTRRVAWRNAPD-ELAAWQRGETGYPIVDAAMRQLNQTGWM 342

Query: 335 NFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGVTGTNT---IRI 391
           + R+R +  S L   +  DWR G  Y     LD +   +   +Q  A  TGT+     RI
Sbjct: 343 HNRLRMICASFLVKDLLHDWREGERYFMSQLLDGDLAANNGGWQWAAS-TGTDAAPYFRI 401

Query: 392 YNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMD 451
           +NPT Q +  D +G+FI +WVPELAQ+P   + +P      + +    PL      P++D
Sbjct: 402 FNPTTQGERFDPDGEFIRRWVPELAQIPGKAVHQPHHWAARQQRQIDYPL------PIVD 455

Query: 452 LEASAKQARDR 462
                KQAR R
Sbjct: 456 ----HKQARTR 462