Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dianthicola 67-19

 Score =  112 bits (281), Expect = 2e-29
 Identities = 128/492 (26%), Positives = 205/492 (41%), Gaps = 67/492 (13%)

Query: 5   NLVWLKRDLRLTDHAPLQAALTSGRPTL-LLYLFEPMLLGDAHYSERHWRFVWQSLQAIN 63
           +LVW + DLRLTD+  L AA       +  +++  P        +     F+  +L+ + 
Sbjct: 4   HLVWFRHDLRLTDNLALHAACQDPDARVEAVFIATPQQWASHAMAPCQAAFLLDNLRCLQ 63

Query: 64  RDLAQS-------KGEVLIVTSDWQTCFARIAERYAIEAIYSHQ----EVGLACTFQRDL 112
           + L +        + +    +  W   F R  ER A    Y+ Q    E       ++ L
Sbjct: 64  QALGEKGIPLHYRQCDDFAASVRWLADFCR--ERQATRLFYNRQYEWNERQRDRQLEQAL 121

Query: 113 ALAQWCQQHDIVWHEFPYAAVIRGAQTR------------KNWDEHWQQVMRSPCC--DP 158
           A    C+  D      P  +V+ G+               K   +     + +P      
Sbjct: 122 AGVSECRGFDDSLL-LPPGSVVTGSGDMYQVFTPFRTAFLKCLQQRDVASVPAPAARRQG 180

Query: 159 DLTRANWLKLDAATLGLRSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSIS 218
           D+T A+    D     + +D PA            G   A   L  F   +   Y+    
Sbjct: 181 DITLASLAPFDYPQTDVHADFPA------------GEAAALQRLRQFCREQVMLYHEQRD 228

Query: 219 SPSLARHACSRMSPYLAWGNISLREMYQTL-LKH--WSVAGFRRSLIALSSRLHWHCHFI 275
            P+LA  A S++SPYLA G +S R+ +  L ++H  W +A          + L W   + 
Sbjct: 229 LPALA--ATSKLSPYLALGILSPRQCFNRLRMEHPDW-LARSDSGAFTWFNELVWREFYR 285

Query: 276 QKFESECEMEFRCVNRAYDSLLQQSS--DAPAAQLAAWQTGHTGIPLVDACMRCLIQTGY 333
                   +   C ++ +    ++ +  +AP  +LAAWQ G TG P+VDA MR L  TG+
Sbjct: 286 HLLVFSPTL---CQHQPFIGWTRRVAWRNAPD-ELAAWQRGETGYPIVDAAMRQLNHTGW 341

Query: 334 LNFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGVTGTNT---IR 390
           ++ R+R +  S L   +  DWR G  Y     LD +   +   +Q  A  TGT+     R
Sbjct: 342 MHNRLRMICASFLVKDLLHDWREGERYFMSQLLDGDLAANNGGWQWAAS-TGTDAAPYFR 400

Query: 391 IYNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVM 450
           I+NPT Q +  D +G+F+ +WVPELAQ+P   + +P      + +    PL      P++
Sbjct: 401 IFNPTTQGERFDPDGEFVRRWVPELAQIPGKAVHQPHDWAARQQRQIDYPL------PIV 454

Query: 451 DLEASAKQARDR 462
           D     KQAR R
Sbjct: 455 D----HKQARTR 462