Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Cryptochrome-like protein cry2 from Alteromonas macleodii MIT1002

 Score =  410 bits (1053), Expect = e-119
 Identities = 220/527 (41%), Positives = 301/527 (57%), Gaps = 40/527 (7%)

Query: 2   EKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQA 61
           + + ++W KRDLRL DH PL  A+      L L+ +EP L+ D H   RHW+F+ QS+  
Sbjct: 8   QSVTVIWFKRDLRLRDHEPLYRAVEKNENILPLFCWEPSLIADPHMDMRHWQFIQQSIDD 67

Query: 62  INRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQH 121
           IN  L  S   +L +  +       IA+ YAI A+ S+QE+GL+ T  RD++++ + ++ 
Sbjct: 68  INAQLP-SDARLLTLHCEVIDALEFIAQHYAISAVRSYQEIGLSVTHNRDISVSNYLKKK 126

Query: 122 DIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWL------KLDAATLGL 175
            I   E  Y AV+RG   R+ W ++W +  R+   D D+   NW+       ++ A   L
Sbjct: 127 KINHIESQYGAVMRGLPHREQWQQNWDRHFRTKTYDIDINSVNWVDWTQHNNINTACKNL 186

Query: 176 RS----DIPATWQS--------------------KQAGMQTGGSDMAWATLEDFFARRGR 211
                 D   T Q+                    K   MQ GG   AW  L+DFF  RG+
Sbjct: 187 DELGLFDCHITSQTGTHFSEKSNYYRQDVLDKLKKLNKMQPGGERRAWQVLKDFFDARGQ 246

Query: 212 EYYRSISSPSLARHACSRMSPYLAWGNISLREMYQT---------LLKHWSVAGFRRSLI 262
            Y++ IS P  AR ACSR+SPYLAWGN+S++++YQ+         LL +     + R+L 
Sbjct: 247 YYHQHISKPEYARRACSRLSPYLAWGNLSIKQVYQSVQHQKQTKKLLPNSDRKQWSRALA 306

Query: 263 ALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVD 322
           AL+SRLHWHCHFIQKFESE  +E+R +N  Y++           +   W  G TG PLVD
Sbjct: 307 ALTSRLHWHCHFIQKFESEHSIEWRPMNSGYENFPFIDGPEAERRFYLWTMGLTGYPLVD 366

Query: 323 ACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAG 382
           ACMR L  TGYLNFRMRAM+ S L HH+NV W     YLA  FLDFEPGIHYPQ QMQA 
Sbjct: 367 ACMRALKYTGYLNFRMRAMVTSFLCHHLNVHWLKAAHYLATQFLDFEPGIHYPQIQMQAS 426

Query: 383 VTGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLE 442
           VTG +T+R+YNP  Q+ + D EG FI KWVPELA++P   +  P L+ PLEAQM    +E
Sbjct: 427 VTGIHTVRLYNPATQSSKLDPEGVFIKKWVPELAKLPSEAVHAPHLLPPLEAQMLDFDVE 486

Query: 443 SPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRILARHVRQAKP 489
             Y++P++D+  + +    RLW +++   V  EA RI+ RH  Q  P
Sbjct: 487 RDYVEPLVDITENNRITAKRLWDYRERDDVVKEAHRIVKRHTMQNSP 533