Pairwise Alignments

Query, 468 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Drug resistance transporter, EmrB/QacA family from Pseudomonas putida KT2440

 Score =  266 bits (681), Expect = 9e-76
 Identities = 169/473 (35%), Positives = 260/473 (54%), Gaps = 21/473 (4%)

Query: 15  RIIFASVALVIALGSLEKSIVTTPLALIGQDLSAGTALTWVITAYLLAATAVLPVYGKLS 74
           R +  ++ L I LG+L+++IV   L  I    S    L WVI+ Y++A T  +P+YGKL 
Sbjct: 11  RNVLTALMLAIFLGALDQTIVAVSLPAISAQFSDVGLLAWVISGYMVAMTVAVPIYGKLG 70

Query: 75  DLFGRVRMLNISIGIFIVGSAMCTFAVDLPTLIGARVVQGIGGGGLIALAFTVIADSIPA 134
           DL+GR RM+   I +F + S  C  A D+P L+ ARV+QGIG GG+++++  +I D +P 
Sbjct: 71  DLYGRRRMILTGISLFTLASIACAMAQDMPQLVLARVLQGIGAGGMVSVSQAIIGDFVPP 130

Query: 135 REVGKYQGYISAVYAVSSVAGPLLGGYFADHLSWRWVFGINLPLGMVALYMVNRHLRHLN 194
           RE G+YQGY S++YA +SVAGP+LGG+  ++LSWRWVF INLPLG+VAL+ + R L  + 
Sbjct: 131 RERGRYQGYFSSMYAAASVAGPVLGGWLTEYLSWRWVFWINLPLGLVALWAIRRALADMP 190

Query: 195 -QKRHSRFDWLGAGLLMLTTTLLLLQLS----SHSFL-PAGWGAF-ALLLCLVLLILVER 247
            Q+R ++ D+LGA LL+L    LLL ++     H++  PA    F   LL L L I  ER
Sbjct: 191 VQRREAQVDYLGAMLLILGLGSLLLGITLVGQGHAWADPAVLALFGCALLGLALFIAHER 250

Query: 248 QVSDPILPARLARLPSYLTAIGLIMASQMLMFALLVYMPLQLQWQKGFSPSQSGTVMVIF 307
           +  +P+LP  L      +    +I  +     +L + MPL+ Q   G     +   ++  
Sbjct: 251 RCPEPLLPLSLFGNRVAVLCWAVIFFASFQSISLTMLMPLRYQGITGAGADSAALHLLPL 310

Query: 308 MFSITTGAYLGGKWVARSGRYKALVVSGFLLAAVAIWQI-----HYDLWVHLSLGIGGLG 362
              +  GA+ GG+  +R+GRYK  +++G LL  VAI+ +        L   L + + G+ 
Sbjct: 311 AMGLPMGAFTGGRMTSRTGRYKPQILAGALLMPVAIFAMALTPPQSALLSALFMLLTGIA 370

Query: 363 LGFTLPSLNVVVQSVLPARDRGIGMSLFNFGRELGGALGVAFCSALFYLRVPQS------ 416
            G   P+  V  QS + ++D G+  S  N  R LGGA+GVA  S+L    + Q       
Sbjct: 371 CGLQFPTSLVGTQSAVASKDIGVATSTTNLFRSLGGAMGVACMSSLLLALLHQGGFELSG 430

Query: 417 --VTVSEHGSQASSVTPDVLAQGFSLVYIGMSALAVVAMILTAWRLRKDALKG 467
             +  S   ++    T   L + F  + +G + +AV+  +L A  L    L+G
Sbjct: 431 NPLLGSLKAAEVDPGTQGRLLETFRQLLMGSAVVAVLG-LLAALALPDRQLRG 482