Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  127 bits (319), Expect = 3e-34
 Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 12/303 (3%)

Query: 16  DLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGEQL 75
           ++ +F TVV  GSF  AA+   MS + +SR +  LE+  G+ LL R ++ L LT EG Q 
Sbjct: 6   EMQVFCTVVDRGSFVGAAEPLGMSKAAISRYVSTLEERLGARLLHRTTRRLSLTDEGRQF 65

Query: 76  FHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTLRM 135
           +H   E+ A ++  ++ V  A  +  G + ++APV      L P+  +F   +P V L +
Sbjct: 66  YHQAREVLAMMDEAEKAVSSASPEASGVLRVNAPVSFGVLHLAPIWADFMSAYPKVELEI 125

Query: 136 QVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTLAHP 195
            +   L       +D A+R      S  V R+LA     LCAS    A  + +       
Sbjct: 126 SLSDRLVDLVDEGIDAAVRIARMDNSSLVGRRLASTRMCLCASPAYLASHAPIEKL---- 181

Query: 196 EQLKEHPLLSLNH---KLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARL 252
             + EH +++ ++      W F     ++ V      R C++  DT    TL G GI+  
Sbjct: 182 SDVAEHGVVAYSNFASGTEWQFEGPEGSESVHTRSVVR-CNNG-DTCRAITLAGGGISLQ 239

Query: 253 PRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWSRVAFSY 312
           P  ++   LR G L+E+LPE++     +Y+++P R+ LP + ++LI++++    R A   
Sbjct: 240 PSFMVAQDLRRGDLVEILPEYQSVELGIYVVYPTRKHLPAKVRSLINFLV---ERFAHPV 296

Query: 313 WHQ 315
           W Q
Sbjct: 297 WEQ 299