Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas sp. S08-1

 Score =  133 bits (335), Expect = 5e-36
 Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 9/298 (3%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           +L+DLA F  +V  GSF  AA++   S   LS+RI  LE+  GS LL R ++ L LT  G
Sbjct: 3   ELEDLAAFALLVEAGSFTAAAERLGCSKGQLSKRISGLERSLGSQLLHRTTRRLHLTAAG 62

Query: 73  EQLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVT 132
             L      L  Q +R ++ V   + +  G + ++ PV         L L+FA  +P V 
Sbjct: 63  AALLPEAQALQTQAQRARQVVRSLQEEVSGTVRLTVPVSLGETFFDALLLDFASRYPQVR 122

Query: 133 LRMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTL 192
           + + + +          D+A+R G  P+   VA+ L     + CA+    A+        
Sbjct: 123 VELDLANVYRDLVADGFDLAIRSGVSPDERLVAKPLFALQEITCAAPAYLARHGKPQT-- 180

Query: 193 AHPEQLKEHPLLSLNHKL---PWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGI 249
             P +L  H  L   H      W++H     ++V+   +  L S+    + +A L G G+
Sbjct: 181 --PAELGAHRCLLNTHYSGFEEWLYHRQHQLERVRV--SGNLASNHYSLLKKAALSGAGV 236

Query: 250 ARLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHWSR 307
           ARLP  +++  L  G+L+ LL + +     V+L+HP +  LP RTQAL DY++  + R
Sbjct: 237 ARLPSYMVQDELADGRLVWLLRDHQTRSTPVFLVHPWQGSLPRRTQALADYLLGWFER 294