Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas sp. S08-1

 Score =  123 bits (308), Expect = 6e-33
 Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 7/289 (2%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           +L  +ALF TVV  GS   AA+   MS S +S++I +LEQ T   LL R +++L LT+ G
Sbjct: 3   QLKRMALFATVVEKGSMVAAAETLGMSASAVSQQIGKLEQSTQVSLLHRTTRKLTLTEAG 62

Query: 73  EQLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVT 132
            QL+ S  ++ A  E+ ++ + + +    GE+ I+APV      +T         HP ++
Sbjct: 63  AQLYQSCRQIVALAEQAEQRLAELRDAPVGELRIAAPVGFSGRLITDALAPLLGAHPGLS 122

Query: 133 LRMQV-GSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLT 191
           LR+      +D   QR +D+A+R G Q +S  VAR L     +LC +    A+   V   
Sbjct: 123 LRLFFQDEQIDLIEQR-IDLAIRVGAQEDSSLVARHLGDWRMLLCVAPAYLARCGAV--- 178

Query: 192 LAHPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIP-TARLCSDELDTIVQATLQGMGIA 250
              PEQL     LSLNH+       H     +Q +   +R+  + + ++    L GMG++
Sbjct: 179 -LGPEQLVGLDWLSLNHERAQQLTLHGPGGALQRLRIESRVACNNILSVRHFCLAGMGVS 237

Query: 251 RLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALID 299
             P   +   L SG L+ LLPEW+     ++++ P+R   P + +  I+
Sbjct: 238 LQPEPEIRAELASGALLVLLPEWQPAPVGIHIVTPRRDAQPAKVRYAIE 286