Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  125 bits (314), Expect = 1e-33
 Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 11/305 (3%)

Query: 13  KLDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEG 72
           K DD+ LF+ VV  GSF+  A++ +++ S +S+RI +LE D    LL R++++L LT  G
Sbjct: 3   KADDIILFVNVVDEGSFSKVAQKLNLTNSVVSKRIARLESDLNVQLLYRSTRKLNLTDAG 62

Query: 73  EQLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVT 132
             L++        I+  ++ V     + RG+I I+ P +  +  L     EF  LH  V 
Sbjct: 63  RTLYNKARIANLAIQDAEDAVSGYSDEVRGKIRITMPNVSAKLVLNRAIAEFCNLHEEVD 122

Query: 133 LRMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAELAAKLSTVTLTL 192
           + + + + +    +   D+A+R     +S  +A++L  +  ++CAS       S      
Sbjct: 123 VELAITNRVTNIIEEGYDLAIRTAHLEDSSLIAKRLIDSKWIVCASPTYLKNKSRPN--- 179

Query: 193 AHPEQLKEHPLLSLNHKLP----WIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMG 248
            HP+ L EH  L   +       W FH       VQ     R+ S+ LD + QA + G+G
Sbjct: 180 -HPDDLTEHNCLIYKYDSTGPDFWPFHIEGELHNVQI--GGRIQSNNLDALRQAAIAGVG 236

Query: 249 IARLPRGLMEPLLRSGQLIELLPEWEIEGADVYLLHPQRRFLPERTQALIDYIMTHW-SR 307
           +A LP+ L+   +  G L  LL E+  +   +Y ++P+ R   ++ + L++Y+   + +R
Sbjct: 237 VAFLPKALVHEDIEDGALSPLLVEYVTKTMGIYAVYPRSRQPDKKLKLLVNYLQEAFGNR 296

Query: 308 VAFSY 312
            A+ Y
Sbjct: 297 SAYFY 301