Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  123 bits (308), Expect = 6e-33
 Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 11/304 (3%)

Query: 14  LDDLALFLTVVRCGSFALAAKQKSMSTSTLSRRIQQLEQDTGSILLIRNSKELVLTKEGE 73
           L DL +F +V   GS +LAAK+   S + +S+RI++LE+  G+ L  R ++++ LT+ G+
Sbjct: 4   LGDLEVFASVAASGSMSLAAKELGYSPAVISKRIKRLEEKLGARLFQRTTRQISLTEAGQ 63

Query: 74  QLFHSYAELFAQIERKQEEVEQAKRDYRGEIAISAPVLPLRHQLTPLALEFAELHPNVTL 133
             +     + A +E  ++ V        G + +SAP    R  + P    F E HP++++
Sbjct: 64  GFYERVLAVLAGLEEAEDFVSGRANTVNGTLKVSAPTSFGRMHIAPHLKGFMERHPDLSV 123

Query: 134 RMQVGSGLDYFSQRDLDIALRFGPQPESDWVARKLARNPSVLCASAE-LAAKLSTVTLTL 192
            + +        +   D+A+R      S  VAR+LA    VLCASA+ + A     T+  
Sbjct: 124 NLVLSDEFIDIIEGGYDLAIRIADLNSSSLVARRLAPVRRVLCASADYVVAHGMPATI-- 181

Query: 193 AHPEQLKEHPLLSLNHKLPWIFHHHSVAQKVQFIPTARLCSDELDTIVQATLQGMGIARL 252
              E LK+H  L  ++   W       A  ++  P   L ++  + I +A + G+GIA  
Sbjct: 182 ---EDLKKHRCLPAHNNDIWRLEGPGGALSIR--PEGMLVTNSSEVIREAVISGLGIALR 236

Query: 253 PRGLMEPLLRSGQLIELLPEWE-IEGADVYLLHPQRRFLPERTQALIDYIMTHWSRVAFS 311
               +   LRSG+L+++LP +E      +  ++P R+FLP + +  IDY+   +      
Sbjct: 237 STWDIGHELRSGKLVQVLPGYEGSRNVTLSAVYPSRQFLPAKVRLFIDYLAGLYG--PSP 294

Query: 312 YWHQ 315
           YW Q
Sbjct: 295 YWEQ 298