Pairwise Alignments

Query, 1309 a.a., ATP-dependent RNA helicase HrpA from Vibrio cholerae E7946 ATCC 55056

Subject, 1309 a.a., ATP-dependent RNA helicase HrpA from Vibrio cholerae E7946 ATCC 55056

 Score = 2608 bits (6760), Expect = 0.0
 Identities = 1309/1309 (100%), Positives = 1309/1309 (100%)

Query: 1    MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEI 60
            MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEI
Sbjct: 1    MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEI 60

Query: 61   ALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQL 120
            ALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQL
Sbjct: 61   ALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQL 120

Query: 121  PKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQI 180
            PKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQI
Sbjct: 121  PKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQI 180

Query: 181  KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA 240
            KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA
Sbjct: 181  KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA 240

Query: 241  TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG 300
            TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG
Sbjct: 241  TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG 300

Query: 301  LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATN 360
            LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATN
Sbjct: 301  LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATN 360

Query: 361  VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI 420
            VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI
Sbjct: 361  VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI 420

Query: 421  RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL 480
            RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL
Sbjct: 421  RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL 480

Query: 481  EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD 540
            EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD
Sbjct: 481  EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD 540

Query: 541  PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL 600
            PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL
Sbjct: 541  PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL 600

Query: 601  RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARN 660
            RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARN
Sbjct: 601  RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARN 660

Query: 661  ARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW 720
            ARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW
Sbjct: 661  ARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW 720

Query: 721  SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQN 780
            SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQN
Sbjct: 721  SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQN 780

Query: 781  RALLAEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLS 840
            RALLAEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLS
Sbjct: 781  RALLAEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLS 840

Query: 841  FEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH 900
            FEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH
Sbjct: 841  FEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH 900

Query: 901  GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR 960
            GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR
Sbjct: 901  GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR 960

Query: 961  MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVAD 1020
            MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVAD
Sbjct: 961  MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVAD 1020

Query: 1021 DDIEQRDLHTWSFGELPKVYQQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAG 1080
            DDIEQRDLHTWSFGELPKVYQQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAG
Sbjct: 1021 DDIEQRDLHTWSFGELPKVYQQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAG 1080

Query: 1081 QRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVW 1140
            QRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVW
Sbjct: 1081 QRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVW 1140

Query: 1141 EPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI 1200
            EPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI
Sbjct: 1141 EPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI 1200

Query: 1201 EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLN 1260
            EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLN
Sbjct: 1201 EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLN 1260

Query: 1261 KIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDKRIINAIEAC 1309
            KIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDKRIINAIEAC
Sbjct: 1261 KIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDKRIINAIEAC 1309