Pairwise Alignments

Query, 1309 a.a., ATP-dependent RNA helicase HrpA from Vibrio cholerae E7946 ATCC 55056

Subject, 869 a.a., ATP-dependent helicase HrpB from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  248 bits (632), Expect = 2e-69
 Identities = 157/458 (34%), Positives = 252/458 (55%), Gaps = 16/458 (3%)

Query: 87  LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
           LPV +    + Q +  +  +I+    G+GK+T +P    E    K   I   +PRRLAA+
Sbjct: 53  LPVLEIIPQVKQQLERNHTLILHAPPGAGKSTVVPLALMEETWLKGKKILMLEPRRLAAK 112

Query: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
           S+A R+A  ++  +G  VGY++RF  + ++ TQI+++T+GI+   I +D  L +   +I 
Sbjct: 113 SIATRMASLLKQPVGHQVGYRIRFESKATEDTQIEVLTEGIMTRMIHHDNALEEVGLVIF 172

Query: 207 DEAHERSLNIDFILGYLKQLLP-RRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYP 265
           DE HER+++ D  +   +++    RPDLK+++ SAT+D  + S     API+E  GR YP
Sbjct: 173 DEFHERNIHADVAMALCREVQQILRPDLKIMVMSATLDMPQLS-DLLQAPIVESHGRQYP 231

Query: 266 VEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRN 325
           VEV +   A      +       + Q + +   E  GDIL F+ G+ EIR T + L    
Sbjct: 232 VEVIHTQDANPWALPAQ------MAQTIKQASQERAGDILAFLPGQGEIRKTLELLQPM- 284

Query: 326 LRDTEIVPLYARLSAGEQNKIFQPH--AGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 383
           L + +++PLY +LS  +Q +   PH    R++VLAT++AETSLT+ GI  V+D G +R S
Sbjct: 285 LPEVKVLPLYGQLSPQKQQQAILPHPEGKRKVVLATSIAETSLTIEGIGIVVDSGFSRTS 344

Query: 384 RYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTN 443
           R+  ++ + +L    I++ +A QR GR GR   G C RL+++        F  PE++  +
Sbjct: 345 RFDPKSGLSKLETVKITKDAAAQRAGRAGRLGPGTCYRLWTKATDDRLLPFRIPEMMEAD 404

Query: 444 LASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQ 503
           LAS+ L +   G+ DI    ++  P    +     LLE LGAI +      ++LT  G+ 
Sbjct: 405 LASLCLDLVQWGIKDIPHMTWLTPPPAGALSQAQELLEHLGAITED-----QKLTPHGEA 459

Query: 504 LARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDP 541
           L  LP  PR+A M+++A + G L     IA+ L  +DP
Sbjct: 460 LRNLPCHPRIAHMLIKAEEDGNLALATDIAAILEEKDP 497