Pairwise Alignments

Query, 537 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  108 bits (269), Expect = 7e-28
 Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 10/186 (5%)

Query: 335 MRMQLEEKQRLTDMIEERTAELRYLVEHDSLTNIYNRRFFSQHLCKML---DEKQSFTLI 391
           +R QL +K  + +     + +LR L E D+LT ++NRR   + +  +L   ++ QS  ++
Sbjct: 386 LREQLRQKGEMEEQQRALSEQLRTLSETDALTGVFNRRALEKSVRAILSGDEDYQSLGVM 445

Query: 392 SFDIDRFKQINDSYGHLAGDYALTHVVDVVKKELVESDIFARFGGDEF-AILSSVTDETA 450
             DID FK IND YGH  GD AL     ++K  L ++DI AR+GG+EF  +L  V+  TA
Sbjct: 446 IIDIDHFKSINDRYGHAMGDLALQKTASLLKGALRKTDILARYGGEEFVVVLQDVSHATA 505

Query: 451 LYTYLERIRKVVEAEPVMLNAETPLTLTISIGA---SINCEYSEPEILQSVDDQLYLSKS 507
             T  +R+R+++E +    + +T L+LT S G          S  E++   DD+LY +K 
Sbjct: 506 TAT-ADRLRRLIEVQ--TFDEQTGLSLTASFGVVWQEARAINSWDELIAIADDRLYEAKR 562

Query: 508 KGRNRV 513
            GRNRV
Sbjct: 563 AGRNRV 568