Pairwise Alignments

Query, 948 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., Chaperone protein HscA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 87/307 (28%), Positives = 128/307 (41%), Gaps = 67/307 (21%)

Query: 11  RFLVGIDLGTTNTVVAFCELSDALEQAPIEIFPVDQLIGPGEVVRRPLLPSFRYHPSHGQ 70
           R   GIDLGTTN++VA      A      E  P  +         R LLPS  ++   G 
Sbjct: 19  RLAAGIDLGTTNSLVATVRSGQA------ETLPDHE--------GRHLLPSVVHYQQQGH 64

Query: 71  FTDSDLTLPWSSELVEGDLPQVIIGEWARDLGAKVEGRQVSSAKSWL--SHPNVDRTQPI 128
                                  +G  ARD  A+     +SS K  +  S  ++    P 
Sbjct: 65  ----------------------TVGYAARDNAAQDTANTISSVKRMMGRSLADIQTRYPH 102

Query: 129 LPWAGASDVEKVSPIVASASYLNHIRQAWNHRHPLNPLEQQE-------VVITVPASFDE 181
           LP+   + V  +  I  +A  LN +R + +    L     +        VVITVPA FD+
Sbjct: 103 LPYRFKASVNGLPMIDTAAGLLNPVRVSADILKALAARASESLSGELDGVVITVPAYFDD 162

Query: 182 TARKLTLEAARLAGLSNIMLLEEPQAVCYDWHHRHQTQANEILHASPLILVCDVGGGTTD 241
             R+ T +AARLAGL  + LL EP A    +      +         +I V D+GGGT D
Sbjct: 163 AQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGKEG--------VIAVYDLGGGTFD 214

Query: 242 LSLIAAQFDAQAALQLNRIGVGDHLMLGGDNIDLALAH-------VAERRFN--QNKKLS 292
           +S++     ++   ++  +  G    LGGD+ D  LA        +A+R  N  Q + L 
Sbjct: 215 ISILRL---SRGVFEV--LATGGDSALGGDDFDHLLADYIREQAGIADRSDNRVQRELLD 269

Query: 293 AAGLSKL 299
           AA  +K+
Sbjct: 270 AAIAAKI 276