Pairwise Alignments

Query, 948 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription (NCBI) from Escherichia coli BW25113

 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 16/141 (11%)

Query: 169 QEVVITVPASFDETARKLTLEAARLAGLSNIMLLEEP--QAVCYDWHHRHQTQANEILHA 226
           ++VVI+VPA F +  RK T  AA LAGL+ + L+ EP   A+ Y  H +  T++      
Sbjct: 115 KDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQQNTRS------ 168

Query: 227 SPLILVCDVGGGTTDLSLIAAQFDAQAALQLNRIGVGDHLMLGGDNIDLALAHVAERRFN 286
               LV D+GGGT D++++     A   ++++    GD+ + G D   + +  V +R   
Sbjct: 169 ----LVFDLGGGTFDVTVLEY---ATPVIEVH-ASAGDNFLGGEDFTHMLVDEVLKRADV 220

Query: 287 QNKKLSAAGLSKLIQQTRQAK 307
               L+ + L+ L      AK
Sbjct: 221 ARTTLNESELAALYACVEAAK 241



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 7  MSSPRFLVGIDLGTTNTVVA 26
          M +    +GIDLGTTN+++A
Sbjct: 1  MDNAELAIGIDLGTTNSLIA 20