Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  103 bits (256), Expect = 1e-26
 Identities = 104/379 (27%), Positives = 166/379 (43%), Gaps = 35/379 (9%)

Query: 26  SAIAALFLYMLRSKLIEHKLDTAT-WFVLLFLAYGLAYTTSSLRFILPMGFAIFVNNLLY 84
           + +AALF     +  + H+ +TA  WF   F A  +  T  +L      G+ +    ++Y
Sbjct: 12  AVVAALFAASYLALALLHRGNTAPLWFAASFGA--IVITPLALLAQSYTGWVVLFAPVIY 69

Query: 85  QLGGYCMLFAV---LRWYQKPIKSGLYLLMMAHSLLFALLLYLLFRLNPEDIGLRILIAS 141
                C++  V      Y+KPI  GL  ++   +++ A L   L    P +  +R++   
Sbjct: 70  LSFAACLILMVPGLAVLYRKPIPWGLVTVLGIVTVVSAALALQL----PVNTLVRVVSYQ 125

Query: 142 LSLSSVYLISAIVAAKNGQRGRPEQTLFAVVLAMMMVMLYVPFVA--------------Y 187
                    S  V  ++  R R    L A + A++   ++VP  A              Y
Sbjct: 126 TPFVLATAASCWVVLRDSPR-RLRDLLLAGLFALLC--MHVPLKAALAISLHTGPHQINY 182

Query: 188 QTLPLLAVFRASTIVVQNLFFFIILGTMLMLFLFEEIEWHRLRSIQDELTGAFNRRHFKE 247
              P   V + ST ++      +IL   ++  + E +E     +  D L+G  NRR F++
Sbjct: 183 MDTPFAVVAQISTGILMVATGLLILVISVLELVRETLEV----ADTDALSGLLNRRGFEQ 238

Query: 248 QVQQKL--KQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVVRHLESLALTECLVAR 305
           +    +  +       + L+DIDHFK IND++GH +GD  I      L+       L+ R
Sbjct: 239 RASDLVHGRTGAAPFALLLIDIDHFKAINDTFGHGVGDQTIRGFGDMLQHTLPQSALIGR 298

Query: 306 YGGEEFAIFARENDFERVSQALDSVRDAISVGFHVEQQPLKVSVSIGAVIFESSHEYGEV 365
            GGEEFAI       E      +SVR AI +G H +Q     +VSIG  +          
Sbjct: 299 VGGEEFAILLERASPEMARLQAESVRLAI-IG-HDDQDVPPFTVSIGVALASRDEPLLAT 356

Query: 366 LRQADKALYQAKQQGRNRI 384
           L +AD ALY+AK+ GRNR+
Sbjct: 357 LERADAALYEAKRSGRNRV 375