Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 13/156 (8%)

Query: 234 DELTGAFNRRHFKEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVVRHL 293
           D LT   NRR F  Q  ++L+ +     +A++DID+FK++ND +GHD+GD V+  V  H+
Sbjct: 207 DALTDIPNRRSFMAQADRQLRMATSGQYLAMIDIDNFKRVNDRFGHDVGDEVLKRVALHI 266

Query: 294 ESLALTECLVARYGGEEFAIF----ARENDFERVSQALDSVRDAISVGFHVEQQPLKVSV 349
           ++ ++ +   AR GGEEFAIF     ++   +RV+     VR+    G H       V++
Sbjct: 267 KT-SMADQAFARLGGEEFAIFFEGLDQQGAEQRVAALCQRVRE--DAGEH------PVTI 317

Query: 350 SIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIM 385
           SIG    +        L +AD+ALY+AK  G++R +
Sbjct: 318 SIGLAKVDRGESLTTALVRADQALYEAKHTGKDRFV 353