Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., predicted diguanylate cyclase (NCBI) from Escherichia coli BW25113

 Score =  112 bits (281), Expect = 2e-29
 Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 8/209 (3%)

Query: 189 TLPLLAVFRASTIVVQNLFFFIILGTMLMLFL---FEEIEWHRLRSIQDELTGAFNRRHF 245
           +L  ++ +  ST  +      +   T++++F+   F  +   +  + +D LT  FNR +F
Sbjct: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF 296

Query: 246 -KEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVVRHLESLALTECLVA 304
             E   Q     K    V ++DIDHFK++ND++GH +GD VI  VV  +      + L+A
Sbjct: 297 FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356

Query: 305 RYGGEEFAIFARENDFERVSQALDSVRDAIS--VGFHVEQQ-PLKVSVSIGAVIF-ESSH 360
           R GGEEF +   + D ER     + +R+ +    G + E   P KV++SIGAV+  E++ 
Sbjct: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416

Query: 361 EYGEVLRQADKALYQAKQQGRNRIMLQDV 389
              E+ R AD ALY+AK+ GRN+++++DV
Sbjct: 417 NPNEIYRLADNALYEAKETGRNKVVVRDV 445