Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., predicted diguanylate cyclase (NCBI) from Escherichia coli BW25113

 Score =  102 bits (255), Expect = 1e-26
 Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 13/227 (5%)

Query: 168 LFAVVLAMMMVMLYVPF------VAYQTLPLLAVFRASTIVVQNLFFFIILGTMLMLFLF 221
           LF   L +M+V   V        V++ + PL        IV+  L F  +        L 
Sbjct: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWV-SYQTATKLA 200

Query: 222 EEIEWHRLRSIQDELTGAFNRRHFKEQVQQKL---KQSKQKSMVALVDIDHFKQINDSYG 278
           E     ++ S +D +TG +NRRH++  ++ +    ++  + + + ++DIDHFK IND++G
Sbjct: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260

Query: 279 HDIGDSVITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVGF 338
           HD+GD  I  + R L+       ++ R+GG+EFA+       E    A+  V + ++   
Sbjct: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320

Query: 339 --HVEQQPLKVSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNR 383
             +  Q  L++SV +  +  + SH Y E L+ AD ALY+AK+ GRNR
Sbjct: 321 LPNTPQVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNR 366