Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  107 bits (267), Expect = 5e-28
 Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 13/299 (4%)

Query: 95  VLRWYQKPIKSGLYLLMMAHSLLFALLLYLLFRLNPEDIGLRILIASLSLSSVYLISAIV 154
           V  W ++  K  + ++     +L+A  +   F L   D    +LIA L+   V  I  + 
Sbjct: 59  VWHWRKRARKINIPVVSGIFGILWAWQIVSKFALITHDHATYLLIALLT---VLFIGTLA 115

Query: 155 AAKNGQRGRPEQT-LFAVVLAMMMVMLYVPFVAYQTLPLLAVFRASTIVVQNLFFFIILG 213
            A N +         F V L +    +++       LP++A+   + +  +N  F     
Sbjct: 116 FASNIKAFTLHSLPTFIVCLWLSDHDIWLRMTYSFALPVVAIAIHNILQTRNDRF----A 171

Query: 214 TMLMLFLFEEIEWHRLRSIQDELTGAFNRRHFKEQVQQKLKQSKQKSMVALVDIDHFKQI 273
             L+  L EE E     S+ D LTG +NRR  + +++        +  V L+DIDHFK  
Sbjct: 172 QELLSRLLEERETLTDLSMMDPLTGLYNRRGLQSRLENLPTVENGEHFVLLMDIDHFKAY 231

Query: 274 NDSYGHDIGDSVITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVR-- 331
           ND YGH +GD  +  V   +     +  +VAR+GGEEF +       E   Q  + +R  
Sbjct: 232 NDHYGHMMGDQALKRVSAAIRDAVRSRDIVARFGGEEFMVLLTNISLEHARQTAERIRQK 291

Query: 332 --DAISVGFHVEQQPLKVSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIMLQD 388
             D        E     V++SIG  IFE     G  L +ADKALY+AK  GRN I+L +
Sbjct: 292 VYDLKIPHLFNESVATNVTISIGIAIFEDEDVEG-ALEKADKALYEAKHMGRNNILLSE 349