Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 961 a.a., putative diguanylate cyclase YcdT from Alteromonas macleodii MIT1002

 Score =  114 bits (286), Expect = 9e-30
 Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 230 RSIQDELTGAFNRRHFKEQVQQKLKQSKQKSM---VALVDIDHFKQINDSYGHDIGDSVI 286
           ++  D+LTG  NRR F   + Q  +++K K     +A++DIDHFKQ+ND Y H +GD VI
Sbjct: 799 QATHDDLTGIANRRAFDRWLVQYFEEAKAKQSPLCLAVIDIDHFKQVNDQYSHLVGDKVI 858

Query: 287 TYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISV-GFHVEQQPL 345
           T V R L          AR+GGEEF +   E D      A+D VR  ++   F    Q L
Sbjct: 859 TEVARILNREVPHYAKCARWGGEEFTVLLPEYDLVNARVAMDHVRKIVAAHDFSFIAQTL 918

Query: 346 KVSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIML 386
           KV++SIG    + + ++  +L  AD+ALY AK+ GRN++ +
Sbjct: 919 KVTISIGVASADGARDHDRMLTHADQALYTAKENGRNQVTI 959