Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 5e-26
 Identities = 111/399 (27%), Positives = 175/399 (43%), Gaps = 56/399 (14%)

Query: 11  LSFLEIATVINNIACSAIAAL--FLYMLRSKLIEHKLDTATWFVLLFLAYGLAYTTSSLR 68
           L  L++ATVI    CS I  L  F+Y+   K+    L         F A  +  T +   
Sbjct: 2   LGELDLATVILMQKCSYIVGLLSFIYL---KMSNRGLPGPVHLAAGFAAMTVGSTLAGYG 58

Query: 69  FILPMGFAIF-VNNLLYQLGGYCMLFAVLRWYQKPIKSGLYLLMMAHSLLFALLLYLLFR 127
               +  A++ + ++L+ + GY +++  L    K +  G ++     ++LF  L+ LL  
Sbjct: 59  EWKILSPALWELGSVLFGIAGYALIWLGL----KTLSDGRFV--NRKTILFTCLVALLA- 111

Query: 128 LNPEDIGLRILIASLSLSSVYLIS--AIVAAKNGQ-----RGRPEQTLFAVVLAM----- 175
                IG+ + +A  +     L +  A +A   G      R R E  L  + L       
Sbjct: 112 -----IGVALQVAGNNTFRAALFNGCAALAYLGGAGVLFARWRKEPLLSRLALGAITGVS 166

Query: 176 ----MMVMLYVPFVAYQTLPLLAVFRASTIVVQNLFFFIILGTMLMLFLFEEIEWHRLRS 231
               + VM  V F  Y ++ L+  F          FF I+L   + LF+   +     R 
Sbjct: 167 GLISLAVMKSVLFPGYASINLVTAF----------FFIIMLNFAISLFVMMLVAERSERK 216

Query: 232 I-----QDELTGAFNRRHFKEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVI 286
           +      D LTG  NRR F    Q             L+DIDHFK IND +GH +GDSV+
Sbjct: 217 LLVLANTDPLTGVKNRRFF---FQTMPAAPDPADAAMLLDIDHFKSINDRFGHAVGDSVL 273

Query: 287 TYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVGFHVEQQPLK 346
             V R +        ++ARYGGEEF IF      ++     + +RDA+++   V+   L+
Sbjct: 274 QEVARRISGSIRGGDVLARYGGEEFIIFLPGAGVDKACMIGERIRDAVAIN-EVDCGGLR 332

Query: 347 VSVSIG---AVIFESSHEYGEVLRQADKALYQAKQQGRN 382
           V V+I    A   +   +   +  +AD+ALY+AK +GRN
Sbjct: 333 VGVTISIGVATTGDMRCDLQMLAEKADRALYRAKTEGRN 371