Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  102 bits (253), Expect = 3e-26
 Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 23/356 (6%)

Query: 50  WFVLLFLAYGLAYTTSSLRFILPMGFAIFVNNLLYQLGGYCMLFAVLRWYQKPIKSGLYL 109
           +F   FLA G      +LR  +    +I V N L        L  +L   Q+  K G ++
Sbjct: 37  YFAAGFLATGFGTVMVALRGDISSFLSIQVGNTLALSAFGFWLAGLLSLEQR--KLGGWI 94

Query: 110 LMMAHSLLFALLLYLLFRLNPEDIGLRILIASLSLSSVYLISAIVAAKNGQRGRPEQTLF 169
            + A   +  + +  +    PED+  RIL+   S ++ Y + A V   +  R    + + 
Sbjct: 95  AIPALLWIAGMFVPSV----PEDMVARILLYHASAATGYFMLAGVLLGSRARASRSRKVL 150

Query: 170 AVVLAMMM----VMLYVPFVAYQTLPLLAVFRASTIVVQNLFFF--IILGTMLMLFLFEE 223
           A +L +      ++  +   A   +P  A+   S + +  +  F  II+ +  ++    E
Sbjct: 151 ATILILQAFAGAIVASIVIPANAAVPN-AIPMTSALSISGMLGFTAIIMISAKIIMEDTE 209

Query: 224 IEWHRLRSIQDELTGAFNRRHFKEQVQQKLKQSKQKSM-VALV--DIDHFKQINDSYGHD 280
           I  HRL ++ D LTG  NRR   E+ +   K+S      VALV  DIDHFK+IND YGH 
Sbjct: 210 IRLHRL-AMTDHLTGVLNRRGLLEEFEHIKKRSHGSDRYVALVLFDIDHFKKINDRYGHQ 268

Query: 281 IGDSVITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVG-FH 339
            GD+V+ +     + +     L  R GGEEFA+ A            +++R  + +    
Sbjct: 269 SGDAVLVHFCNIAQRVIGERGLFVRMGGEEFALVAEVESPSSTVTLAEAIRSNLRLSKIT 328

Query: 340 VEQQPLKVSVSIG---AVIFESSHEYGEVLRQADKALYQAKQQGRNRIMLQDVSAS 392
              + +KV+ S+G   A+I ++  +   ++ +AD+ALY AK+ GRNR ++   SA+
Sbjct: 329 ARNEAIKVTTSVGISEAMIKDA--DLSVMMTEADRALYAAKKAGRNRTVIHVNSAN 382