Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  135 bits (339), Expect = 5e-36
 Identities = 111/429 (25%), Positives = 195/429 (45%), Gaps = 49/429 (11%)

Query: 4   SLNRKMTLLFIASLL---LVGFIAFSLLNLDQRQQQTNAELDTILEIQNSIAMLRSQLWV 60
           S+ RK+ L+ + SLL   +V F AF   ++  R    N+ LD+    Q   A L   LW 
Sbjct: 12  SIGRKLLLIVLPSLLFGTVVMFSAFEHYSVRDRLSALNSRLDSFAITQG--AALVKPLWE 69

Query: 61  FLQYNDAHSLEQVYRAQQVLAGQLEMETVFGQHLAGIQRMNNSLAGLLEQERYMAEESGI 120
           F    D  ++++ +++   +    E  TVFG    G + + ++  G  +  R +  +  +
Sbjct: 70  F----DFAAVQRQFQSYPDVPELFEA-TVFG---IGGEIVASAQGGDTDGRRDVFRK--V 119

Query: 121 TKLVDGIGTYELLHSRYNILVQNMNEELAYFQRQVMEESINNQRYLLLTTMAHLLLFSSV 180
             L+      E    R          E+A+   +V  E +  +                 
Sbjct: 120 VPLIQQTPGGEYPVGRL---------EVAFHDGKVRSELVRQR----------------- 153

Query: 181 VCGIALVVLRRFRHGCKTLQEGIEQMAKGDLASRISTQNNEQEFVQLTQFFNQMKASLQS 240
             G A+V+   F      L   +  +  G L    ++ ++    +         +  L  
Sbjct: 154 -AGAAIVLSGAFLLVTAVLLAAVRHLVTGPLTRLRNSLHHNASVLMREPLVWSSRDELGE 212

Query: 241 TTVTKDELQAEVARKTAKLERQKAELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNM 300
                ++L  E+ ++T  + +       L+ RD LTG+ NRR  + ++ HA+  A R N 
Sbjct: 213 VVHAYNQLLTEIDQRTEDIHQ-------LANRDLLTGLPNRRLLEDRIGHAIALAGRQNR 265

Query: 301 KLALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLL 360
            +ALLF D+D FK +NDT GH+ GD +L+ IA R+   +R  D   R GGDEFV+ ++ L
Sbjct: 266 SIALLFADIDNFKVVNDTLGHKQGDALLRIIADRIHDIMRGMDTVARWGGDEFVIVVESL 325

Query: 361 QDHSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTA 420
                  + A +++E +  P+QL    L +GVS+G+++YP+    +  L++ AD A++ A
Sbjct: 326 NSAGEAASVAEKLIETIGVPVQLGSNLLRVGVSVGISMYPQDGADITTLIKNADMALFEA 385

Query: 421 KHQSGNTVY 429
           K +  NT +
Sbjct: 386 KGRGRNTFH 394