Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 97.1 bits (240), Expect = 6e-25
 Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 2/266 (0%)

Query: 44  KIAVSQTPLSSPFYLADQLGFFKQQGIDVELVACSGGVQCSQALFQGAVSYATASESVAM 103
           ++A +  P+S+   +A   G F+++G+D+ +   + G Q    +  G    AT +E+   
Sbjct: 31  RLAQNLAPISALTIVAKAQGLFEKEGLDISVSNFTSGKQALDTVIGGGADIATTAEAPVT 90

Query: 104 FSSFERQDFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMIRASASEFYFDSLLL 163
            ++   Q    +     SD  +K L  +   I+S ADL  K++     + SE Y   LL 
Sbjct: 91  AAAMAGQPIAFVTGMEYSD--IKTLTAKKAAIKSFADLKGKKIAYTAGTGSEVYTTELLK 148

Query: 164 ANNLKGIPIDKVYGTADQLYQQLFDKQLDAISIWEPWGYKIGVAAESKVTNLSLPGIYTL 223
              L    +  V     ++   L    +DA   WEP       A    V  L   G+Y+ 
Sbjct: 149 KAGLTSKDVTLVNLKPQEMLPALAAGSIDAYDTWEPHIANGRKALGDDVALLDTKGVYSE 208

Query: 224 SFNLLTMKPTTEEEKQRSLAILKALKQAIDWIHQNPERTRYRVAGVLNIDEKQLRWSWQD 283
           +FN++ M+   +   Q     L AL  A  W+  +PE     V+  + +  + L+  W D
Sbjct: 209 TFNIVVMQDYLKANPQIVSKFLAALIAAEAWVKAHPEEAIEVVSKAVGMKPEDLKPIWSD 268

Query: 284 YSFRLSLGNTLLTNLQLQGRWALENK 309
           Y +++ +G   +  L+   +W L+ K
Sbjct: 269 YVYQVGIGAKQIDALKAHAQWRLDTK 294