Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 14/227 (6%)

Query: 43  IKIAVSQTPLS-SPFYLADQLGFFKQQGIDVELVACSGGVQCSQALFQGAVSYATASESV 101
           +K+AV+   +  +P  +A   GFF +  +DVELV      +          + A    ++
Sbjct: 59  LKLAVNLNAVCLAPVVIAHGQGFFTKHNLDVELVNFGNSTEVLLEAIATGKADAGVGMAL 118

Query: 102 AMFSSFERQDFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMIRASASEFYFDSL 161
               + E Q F +  +       L+LL+  +  +  + DL  K +G+   ++ +  F S+
Sbjct: 119 RWLKALE-QGFDVKLTAGTHGGCLRLLSAVNGAVAKLEDLKGKAIGVTDMASPDRNFFSI 177

Query: 162 LLANNLKGI-PIDKV---YGTADQLYQQLFDKQLDAISIWEPWGYKI---GVAAESKVTN 214
           LL  +  G+ P+  V      AD L   L   ++ A+S  +P+ Y++   GVA E   TN
Sbjct: 178 LLKKH--GVDPVRDVEWRLYPADLLGTALERGEVQAVSGSDPFMYRLIKSGVARELS-TN 234

Query: 215 LSLPGIYTLSFNLLTMK-PTTEEEKQRSLAILKALKQAIDWIHQNPE 260
           L +     LS  ++ +      E+K+  +A+ +A+ +A D+  Q+PE
Sbjct: 235 L-VEEYANLSCCVVGVTGKLVREDKRVVVALTQAILEAHDYSVQHPE 280