Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 15/238 (6%)

Query: 57  YLADQLGFFKQQGIDVELVACSGGVQCSQALFQGAVSYATASESVAMFSSFERQDFLILA 116
           YLADQLG+F+      + V      Q    +  G + + +    + + +     D  ++A
Sbjct: 78  YLADQLGYFEGTNTRPQYVGKIAAPQIIPLVGTGEIDFGSRMVPLVISAIASGADLKVVA 137

Query: 117 S---FVQSDNDLKLLALESETIRSVADLHNKRVGMIRASA-SEFYFDSLLLANNLKGIPI 172
           +    +Q    +K    +   I +  DL  K +G     A +EF     L  +++    I
Sbjct: 138 AGGKTLQEAPHMKYFVRKDSGIHTPKDLEGKTIGFNSFGACAEFVTKKYLRQHDVDVSKI 197

Query: 173 DKVYGTADQLYQQLFDKQLDAISIWEPWGYKIGVAAESKVTNLSLPGIYTLSFNLLTMKP 232
           + V    +Q  Q L  +  D   I  P+  +    A++    + L   + L   L  M P
Sbjct: 198 NFVVIPDEQAEQTLVTRNTDLAIIHAPFSGR----ADNADQLVRLWSDFDLDGGLGGMAP 253

Query: 233 TT------EEEKQRSLAILKALKQAIDWIHQNPERTRYRVAGVLNIDEKQL-RWSWQD 283
            +       E  +    ++ AL +A +W++ NPE  R  VA  +N+D K + R+++ D
Sbjct: 254 YSAHGRFIREHPEAVRDVVTALAKAGNWVNANPEEARKLVAKRINMDLKNVDRFAYVD 311