Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 21/222 (9%)

Query: 54  SPFYLADQLGFFKQQGIDVELVACSGGVQCSQALFQGAVSYATASESVAMFSSFERQ--- 110
           SP  +A + G+F++ G+ VEL+  +G    S      +++ A A  +V M   + +    
Sbjct: 52  SPVVVAQERGYFERNGLQVELINYTG----STDQLLESLATAKADAAVGMIHRWLKPLEA 107

Query: 111 --DFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMIRASASEFYFDSLLLANNLK 168
             D  I+ S       ++L+  +S  +  +A L  K +G+   ++    F S+LLA N  
Sbjct: 108 GFDVKIVGS--SHGGCVRLVGAKSAGVSDLASLKGKVIGVSDIASPGKNFFSILLAKN-- 163

Query: 169 GIPIDKVYG----TADQLYQQLFDKQLDAISIWEPWGYKIGVAAESKVTNL--SLPGIYT 222
           GI  DK        AD L   +   ++ AI+  +P  Y I    +     L  +L G Y 
Sbjct: 164 GIDADKDVTWRQYPADLLDVAVKKGEIQAIADGDPNVYLIEKRNQGAYVELASNLSGEYK 223

Query: 223 LSFNLL--TMKPTTEEEKQRSLAILKALKQAIDWIHQNPERT 262
                +         ++K    A+++A+ QA  ++ +NP  +
Sbjct: 224 DKVCCIVGARGELVRKDKATVAALVRAIAQASSYVAENPNES 265