Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 17/201 (8%)

Query: 8   RRWIVYLSILAIAFVAWRWLTPLATAISVNANAAPIKIAVSQTPLSSPFYL----ADQLG 63
           RR ++  S +A A +A      L    +  A     K++++    ++ +YL    ++QLG
Sbjct: 4   RRTLISASAIAAATIA------LPRVFAQQAKLEKTKVSIAVGGKAAFYYLPLTISEQLG 57

Query: 64  FFKQQGIDVELVACSGGVQCSQALFQGAVSYATASESVAMFSSFERQDFLILASFVQSDN 123
           +FK +G+DVE+   +GG +  QA+  G+    + +    +    + Q F   A  +Q   
Sbjct: 58  YFKAEGLDVEISDFAGGARALQAVVGGSADVCSGAYEHTINLQAKNQFF--QAFVLQGRA 115

Query: 124 DLKLLALESETI---RSVADLHNKRVGMIRASASEFYFDSLLLA-NNLKGIPIDKV-YGT 178
               + + ++ +     + DL  K++G+    +S     +L+L+   LK   +  +  G 
Sbjct: 116 PQIAVGVSTKNMAGYTGIQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSYIGVGV 175

Query: 179 ADQLYQQLFDKQLDAISIWEP 199
           A      L   Q+DAIS  +P
Sbjct: 176 AAGALTALRSGQIDAISNTDP 196