Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., ABC transporter substrate-binding protein from Variovorax sp. OAS795

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 41/276 (14%)

Query: 31  ATAISVNANAAPIKIAVSQTPLS--SPFYLADQLGFFKQQGIDVE----------LVACS 78
           A  ++  A A   KIA+  +  +  +P  LAD+ G FK+ G+DVE          L   S
Sbjct: 19  AAGMAGTAAAQETKIALGMSGWTGFAPLSLADKAGIFKKNGLDVELKMIPQKDRHLALAS 78

Query: 79  GGVQCSQALFQGAVSY-ATASESVAMFSSFERQDFLILASFVQSDNDLKLLALESETIRS 137
           G +QC+    +  V++ A     V +F    + D    A  +   ND+K           
Sbjct: 79  GAIQCAATTVETHVAWNANGVPIVQIF----QMDKSYGADGIAVRNDVK----------G 124

Query: 138 VADLHNKRVGMIRASASEFYFDSLLLANNLKGIPIDKVYGTADQLYQQLF-DKQLDAISI 196
            ADL  K +G+     + ++  + +L  N   +   K+     Q   Q F   Q DA   
Sbjct: 125 FADLKGKTIGVSAPGTAPYFGLAWMLNKNGMTLKDVKLVSLEPQPAAQAFVAGQNDAAMT 184

Query: 197 WEPWGYKI---GVAAESKVTNLSLPGIYTLSFNLLTMKPT-TEEEKQRSLAILKALKQAI 252
           +EP+   +     A +   T L     Y +  + +   PT  +   + + A+ ++  +A+
Sbjct: 185 YEPYLSTVRANPTAGKILATTLD----YPMVMDTVGCAPTWLKANAKAAQALTQSYFEAL 240

Query: 253 DWIHQNPERTRYRVAGVLNIDEKQLRWS-----WQD 283
           D I  +P +    +   +    +Q   S     WQD
Sbjct: 241 DMIKADPAKANELMGSAVKQTGEQFAKSSAFLRWQD 276