Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 710 a.a., Stalked cell differentiation-controlling protein from Alteromonas macleodii MIT1002

 Score = 76.3 bits (186), Expect = 5e-18
 Identities = 107/473 (22%), Positives = 189/473 (39%), Gaps = 58/473 (12%)

Query: 234 VGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSLGDTYFKQGRYEESILYFEQ 293
           +G +   L Q   A  Y   A +   E     L+  ++  +G    K G  +++I    +
Sbjct: 198 IGEIYSLLNQATLAHTYYQDAFDSIEETQETRLLGVIKTRIGALSLKTGSVDQAIRAINE 257

Query: 294 AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQHLFQALEYVNQHKDQHLQGLIYLS 353
               L   + +  +A   + LG+A +E  +  +G + L +A+++ +      L     L+
Sbjct: 258 GLELLLSTSDVGAIAEAKMLLGRALVENGDTAKGRELLQEAMQFADSSGQAKLVKEGRLA 317

Query: 354 LAQAHFKEQKYAQAIDYANQAVA-------ISESASLPRIKAQAYLQLAKIAEA------ 400
           LAQA+ KEQ +  A++ A            +    S   ++  A++ L +  +A      
Sbjct: 318 LAQAYMKEQSFELALEEARTGTIDARKNRDLRGQLSFLSLQLSAFVSLGEFKKALDIQSV 377

Query: 401 EQQYQEAL-------SWYRQYAESELL--LRNTEQRKAFEALDLAKAELEQKRGVNFWRE 451
            QQ +E L       +     AE EL+   R  E+ +  + L LA+AE E  +   FW  
Sbjct: 378 MQQLREVLLDSENKSAIEGLQAEIELVRQSRTLEKLEESKQLALAQAERENLQTTLFWSI 437

Query: 452 NYQALAEKYEMLKWQRVSLSLLVIVF-------ALILPIAHYRRRKECDQNQQDSL---- 500
           +  AL   +  L W R       I+         L L   +    +     ++ SL    
Sbjct: 438 SLAALLLTF--LVWSRYKQRQQTIILRREVRQQTLNLQEKNQELERAYKTLEEVSLRDPL 495

Query: 501 ------HGVLSRTSGLERLTHIEACQ-----QTEHVHLLALLDIDQLRQFNERHGYERGD 549
                 H + S+  G  R +   A Q     +T+   L  L+DID  ++ N+ +G+  GD
Sbjct: 496 TGLYNRHYLESQLPGEIRRSQFSAKQSPSTGKTKQDLLCLLIDIDHFKRINDDYGHIAGD 555

Query: 550 IALQNTINTLLHQLRAKEFVCRLGDDEFLVVMPNCRRTLSETRLFVLHHA--LNGKTPTD 607
             L    N L    R  + + R G +EFLVV   CR++  E    V      +   TP D
Sbjct: 556 KVLSAFANVLKEVFRQTDLIIRWGGEEFLVV---CRQSTREELPEVAERCREMVASTPFD 612

Query: 608 --AKSTVGLSVTLSYLAV-----ESGLASFTHFYPKLDSALSIAKQSGNGGLI 653
              +  + ++ ++ +  +     E   A++   +  +D AL   K SG  G +
Sbjct: 613 IGLEKPINITCSIGFSLLPPDREEDFDAAWKRTFAVIDYALYATKLSGRNGWV 665



 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 24/232 (10%)

Query: 241 LGQYESALDYLNKALEYRLEQGNPLLIAQVEHSLGDTYFKQGRYEESILYFEQAKAHLTP 300
           L  Y  AL Y+ +A+     + N LL AQ+   LG    +QG  E ++   +QA  +   
Sbjct: 125 LSNYAIALTYVRRAMSIAQIERNELLKAQLNLELGIIQQEQGEIETALEPLKQALRYFRE 184

Query: 301 ANYLFGLAYVHLGLGKAYIELNNFVEGDQHLFQALEYVNQHKDQHLQGLIYLSLAQAHFK 360
            N    ++   L +G+ Y  LN       +   A + + + ++  L G+I   +     K
Sbjct: 185 NNMASEMSVTLLRIGEIYSLLNQATLAHTYYQDAFDSIEETQETRLLGVIKTRIGALSLK 244

Query: 361 EQKYAQAIDYANQAVAISESASLPRIKAQAYLQLAKIAEAEQQYQEALSWYRQYAESELL 420
                QAI   N+ + +  S S           +  IAEA+     A            L
Sbjct: 245 TGSVDQAIRAINEGLELLLSTS----------DVGAIAEAKMLLGRA------------L 282

Query: 421 LRNTEQRKAFEALDLAKAELEQKRGVNFWRENYQALAEKYEMLKWQRVSLSL 472
           + N +  K  E L  A    +        +E   ALA+ Y  +K Q   L+L
Sbjct: 283 VENGDTAKGRELLQEAMQFADSSGQAKLVKEGRLALAQAY--MKEQSFELAL 332



 Score = 30.0 bits (66), Expect = 4e-04
 Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 11/186 (5%)

Query: 243 QYESALDYLNKALEYRLEQGNPLLIAQVEHSLGDTYFKQGRYEESILYFEQAKAHLTPAN 302
           QY  A       LE  L+Q    + A    +LG       R+E S   F  A    T   
Sbjct: 49  QYTDADSKALLLLEQALQQQQ--MSADTFSALGLLLQNASRFEVSKAIFNAALERYTTDG 106

Query: 303 YLFGLAYVHLGLGKAYIELNNFVEGDQHLFQALEYVNQHKDQHLQGLIYLSLAQAHFKEQ 362
            L  +A   L L  +   L+N+     ++ +A+      +++ L+  + L L     ++ 
Sbjct: 107 ELNKMASTLLQLATSERHLSNYAIALTYVRRAMSIAQIERNELLKAQLNLELGIIQQEQG 166

Query: 363 KYAQAIDYANQA--------VAISESASLPRIKAQAYLQLAKIAEAEQQYQEALSWYRQY 414
           +   A++   QA        +A   S +L RI  + Y  L +   A   YQ+A     + 
Sbjct: 167 EIETALEPLKQALRYFRENNMASEMSVTLLRI-GEIYSLLNQATLAHTYYQDAFDSIEET 225

Query: 415 AESELL 420
            E+ LL
Sbjct: 226 QETRLL 231