Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Xanthobacter sp. DMC5

 Score =  380 bits (977), Expect = e-110
 Identities = 185/337 (54%), Positives = 241/337 (71%), Gaps = 2/337 (0%)

Query: 6   TVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVE 65
           T+LA +  A+ A+ + +A+A   TL  V  +G + CGVS GLPGFS  +A G+W G DV+
Sbjct: 3   TILALMAGAALALGATAATA--QTLKTVKDRGELVCGVSKGLPGFSAQDASGKWTGFDVD 60

Query: 66  YCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVN 125
            C+A+AAA+  D  KVK+VPLTA ERF AL  G+IDVLSRN+TWTL+R++ LGL F  +N
Sbjct: 61  VCKALAAAIFDDANKVKYVPLTADERFPALTKGDIDVLSRNSTWTLEREAKLGLLFTAIN 120

Query: 126 YYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQT 185
           YYDGQGF+V+    V SA EL+ + VCVQ+GTT E N  DYF  +GMT + V   T+ + 
Sbjct: 121 YYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAESNTKDYFAANGMTLELVTLPTSGEL 180

Query: 186 SKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAK 245
            K +D G+CD LTTD S LYALRL + KP   +VLP++ISKEPLGPVVRQ DD+WFN+ K
Sbjct: 181 VKAYDEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVK 240

Query: 246 WVLYAMVNAEEYGITSKNVDEMMKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGN 305
           W +YAM+NAEE G+ +  +D  +KS  PEVKR++G +G  G  LG+  D+  +IVK VGN
Sbjct: 241 WTVYAMINAEELGVATNTLDAAIKSQKPEVKRLVGNEGNYGEELGVTKDFVVRIVKAVGN 300

Query: 306 YGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           YGESF+R VG+ S L I RG+N LW+ GG  YAPP+R
Sbjct: 301 YGESFERNVGAASKLGIPRGINQLWSMGGIQYAPPVR 337