Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Xanthobacter sp. DMC5

 Score =  416 bits (1068), Expect = e-121
 Identities = 189/333 (56%), Positives = 254/333 (76%), Gaps = 1/333 (0%)

Query: 11  VVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAM 70
           ++ A++ +LSL+ +   +TLD V ++G + CGV+ GLPGFS+PN K EW G+DV++C+A+
Sbjct: 4   ILLAAAGLLSLAGAVQAATLDDVKARGALNCGVTQGLPGFSSPNDKNEWSGLDVDFCRAI 63

Query: 71  AAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQ 130
           AA +  D TKVKF PL+AK+RFTAL SG IDVLSRNTTWT+ RD+ LG NF GV YYDGQ
Sbjct: 64  AAGIFNDPTKVKFTPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVMYYDGQ 123

Query: 131 GFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVV-FDTAAQTSKGF 189
           GF+++K +G+KSAKEL  AS+CVQ+GT+ ELN+ DYFR + M Y+ V+ F T  +T K +
Sbjct: 124 GFLIRKSVGLKSAKELQEASICVQTGTSNELNVGDYFRANNMKYREVIAFATLDETVKAY 183

Query: 190 DAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLY 249
           ++GRCDV T+D+S L A+RL L  P   V+LPE ISKEPLGP+VR  DD+WF++ KW  +
Sbjct: 184 ESGRCDVFTSDKSQLAAVRLKLTNPADHVLLPETISKEPLGPLVRHGDDQWFDLVKWTYF 243

Query: 250 AMVNAEEYGITSKNVDEMMKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGNYGES 309
           A++N+EE GIT KNVDEM+KS+NP++KR+LG DG  G G+G+  DW  +I+K  GNYGE 
Sbjct: 244 ALLNSEELGITQKNVDEMVKSENPDIKRLLGTDGKYGEGIGLTPDWVVRIIKATGNYGEI 303

Query: 310 FDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           +DR VG  +PL I+RG+N LW  GG  Y PP+R
Sbjct: 304 YDRNVGPATPLGIERGLNNLWTKGGIQYGPPVR 336