Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 13/230 (5%)

Query: 27  ESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAV---LGDKT---- 79
           + TL K+ S   IT G       FS     G+  G  + Y   +A+ +   +  KT    
Sbjct: 27  DGTLGKIASAKSITLGYRDASVPFSYV---GDNSGKPMGYSVELASKIVERIQQKTGVAT 83

Query: 80  -KVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDL 138
             VK+  +T++ R   +Q+G +D+   +T  T +R   +  ++ G  Y  GQ  +  KD 
Sbjct: 84  LNVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSY-GFIYVKGQ-LLTAKDS 141

Query: 139 GVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLT 198
           G+K   +L G +V   +GTT E  L  Y          +      +  K  + GR     
Sbjct: 142 GIKGFPDLAGKNVVTTAGTTNERFLKSYNAEHKTNMFVISAKDHGEAFKMLETGRAAAFY 201

Query: 199 TDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVL 248
            D + LY  R   + P + VV+ E  S+E    ++R+DD ++  V    L
Sbjct: 202 MDDALLYGERAKAKDPHNWVVVGEEQSREIYSCMLRKDDPQFLAVVNETL 251