Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  439 bits (1130), Expect = e-128
 Identities = 214/339 (63%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   TVLASVVAASSAMLSLSASA-AESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDV 64
           T LA++ A  +A+L L+++A A +TLD +  +GFI CGVS GLPGF  P++KG+  GIDV
Sbjct: 6   TTLAAIGA--TAVLGLASTAEAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSKGKMTGIDV 63

Query: 65  EYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGV 124
           + C A+AAAV GD +KVKF  LTAKERFTALQSGEID++SRNTTWT  RDS +GL F GV
Sbjct: 64  DVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVFTGV 123

Query: 125 NYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQ 184
            YYDG GF+V   LGV +AK+L+GA+VC+Q+GTTTELN++DYFR  GM Y P+ FDTA +
Sbjct: 124 TYYDGIGFLVNNKLGVTAAKQLDGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDTADE 183

Query: 185 TSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVA 244
           ++KG +AGRCDVLTTDQSGLYA R+ + +PD  VVLPE+ISKEPLGP+VR+ DD+WF++ 
Sbjct: 184 SAKGLEAGRCDVLTTDQSGLYAQRIKMAQPDEFVVLPEVISKEPLGPLVRKGDDEWFSIV 243

Query: 245 KWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQV 303
           KW L+AM+NAEE GITS+NV+E  K + NP+V R+LG DG  G  L +R DW  QIVKQV
Sbjct: 244 KWTLFAMLNAEEMGITSQNVEEQAKTTKNPDVARLLGADGEYGKDLKLRKDWVVQIVKQV 303

Query: 304 GNYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           GNYGE F+R +G GS LKI RG+NALWN GG  YAPP+R
Sbjct: 304 GNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342