Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 15/269 (5%)

Query: 23  ASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVK 82
           A+AA S +D++ ++  +  GV T  P F   N  G + G D +  +  A  +LGD+ KV+
Sbjct: 28  AAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVE 87

Query: 83  FVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKS 142
           FV +    R   LQS ++D++  N T T +R  A  ++F   N       +V  D  VKS
Sbjct: 88  FVAVEPASRIPFLQSDKVDLILANMTVTPERKEA--VDFTNPNLKVAVQALVPNDSAVKS 145

Query: 143 AKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQS 202
             +L   +  V +GTT ++    +   +   +K + F+  +++ +   AGR D    D  
Sbjct: 146 LNDLATRTTIVTTGTTADI----WLTKNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNL 201

Query: 203 GLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSK 262
            L++     + P   V+  ++  + P+ P V++ +     +  WV   +    E     K
Sbjct: 202 VLFSWA--KQNPGYRVLEEKLGDEAPIAPAVKKGN---IELRDWVNAELAKLGEEKFLLK 256

Query: 263 NVDEMMK---SDNPEVKRILGLDGPKGTG 288
             D+ ++   SD+ + + ++ ++G K  G
Sbjct: 257 LYDQYVRKELSDDTKPESVI-VEGGKWQG 284