Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 11/260 (4%)

Query: 4   KLTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGID 63
           K +VL + +AA+  + +  A AA+ TL K+   G IT         FS     G+  G  
Sbjct: 2   KSSVLMASMAAAVLLAATGAQAAD-TLAKIAESGKITLAYRESSVPFSYLEGPGKPIGFS 60

Query: 64  VEYCQAMAAAVLGDKTK----VKFVPLTAKERFTALQSGEIDVLSRNTTWTLQR--DSAL 117
           VE   A+  AV     K    V  +P+T++ R   + +G ID+   +TT    R  D A 
Sbjct: 61  VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLITNGTIDLECGSTTNNTARGKDVAF 120

Query: 118 GLNFVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPV 177
            +N    ++Y G   +VKK   +K   +L   +V   +GTT  L +  Y     +    V
Sbjct: 121 AIN----HFYTGTRLLVKKSSKIKDYADLAKKTVASTTGTTNVLVMRKYNIEKNLGMNIV 176

Query: 178 VFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDD 237
           +    A +    ++ R      D   L+ L  N + P    V+ E +  EP   ++ +DD
Sbjct: 177 LGKDHADSFLLLESDRAAAFAMDDILLFGLIANAKTPSDFEVVGESLQVEPYACMLPKDD 236

Query: 238 DKWFNVAKWVLYAMVNAEEY 257
             +  V      AM+ + E+
Sbjct: 237 PAFKKVVDDTFAAMMKSGEF 256