Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  353 bits (905), Expect = e-102
 Identities = 175/340 (51%), Positives = 235/340 (69%), Gaps = 6/340 (1%)

Query: 5   LTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDV 64
           L   ASV+A ++A    + + A  TLD V  +G + CGV+ G+ GFS P+ +G W G+DV
Sbjct: 10  LLAAASVIAFAAA----APAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDV 65

Query: 65  EYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGV 124
           + C+A+AAAVLGD  KV FVPL +++RF+ALQ+GEID+L+RNTTWTL RD++LG NF  +
Sbjct: 66  DTCRAIAAAVLGDGKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTI 125

Query: 125 NYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQ 184
            YYDGQGF+V K L V SAK+L  A++C QSGTT E N++DYFR  G+  K VVF++   
Sbjct: 126 TYYDGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQGIPVKTVVFESFEA 185

Query: 185 TSKGFDAGRCDVLTTDQSGLYALR-LNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNV 243
           + K F +GRC   TTD S L  LR      PD  V+LPE+ISKEPL P+VR+ DD+WF +
Sbjct: 186 SFKAFFSGRCQAFTTDASALAGLRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAI 245

Query: 244 AKWVLYAMVNAEEYGITSKNVDEM-MKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQ 302
           AKWV  A++ AEE G+T  N DE+   S +P  +R++G     G  LG+  +WS++ +K 
Sbjct: 246 AKWVPNALIEAEEAGVTQANADELKANSKDPAQQRLVGTGEDLGKLLGLDKEWSFRAIKA 305

Query: 303 VGNYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           VGNYGE F+R VG  S LK+ RG N LW+ GG +YAPP+R
Sbjct: 306 VGNYGEMFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 345