Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., glutamate and aspartate transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 80.5 bits (197), Expect = 5e-20
 Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 6/238 (2%)

Query: 7   VLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEY 66
           +LA  ++A  A    +A AA STLDK+   G I  G       FS  + + +  G   +Y
Sbjct: 10  ILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDY 69

Query: 67  CQAMAAAVLGDKTK----VKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFV 122
             A+  AV     K    VK +P+T++ R   LQ+G  D    +TT  ++R       F 
Sbjct: 70  SNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FS 127

Query: 123 GVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTA 182
              +  G   + KK   +K    L   +V V SGTT+E+ L        M  + +     
Sbjct: 128 DTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDH 187

Query: 183 AQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKW 240
             + +  ++GR      D + L   R   +KPD+  ++ +  S+E  G ++R+DD ++
Sbjct: 188 GDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQF 245