Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Enterobacter asburiae PDN3

 Score = 80.5 bits (197), Expect = 5e-20
 Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 10/275 (3%)

Query: 4   KLTVLASVVAASSAMLSLS-ASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGI 62
           KL     V+  S+ ++    A AA STLDK+   G I  G       FS  +   +  G 
Sbjct: 5   KLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVGY 64

Query: 63  DVEYCQAMAAAVLGDKTK----VKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALG 118
             +Y  A+  AV     K    VK +P+T++ R   LQ+G  D    +TT  L+R     
Sbjct: 65  SQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA 124

Query: 119 LNFVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVV 178
             F    +  G   + KK   +K   +L G +V V SGTT+E+ L        M  + + 
Sbjct: 125 --FSDTIFVVGTRLLTKKGGEIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRIIS 182

Query: 179 FDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDD 238
                 + +  ++GR      D + L   R   +KPD+  ++    SKE  G ++R+DD 
Sbjct: 183 AKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDDP 242

Query: 239 KWFNVAKWVLYAMVNAEEYGITSKNVDEMMKSDNP 273
           ++    K +   +   +  G   K  D+  K+  P
Sbjct: 243 QF---KKLIDDTIAQVQTSGEAEKWFDKWFKNPIP 274