Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Escherichia coli ECRC62

 Score =  403 bits (1035), Expect = e-117
 Identities = 191/340 (56%), Positives = 252/340 (74%), Gaps = 1/340 (0%)

Query: 4   KLTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGID 63
           K  ++A++ AAS  +   + + A +TLD V  +GF+ CG+S GLPGFS  +A G++ GID
Sbjct: 2   KKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGID 61

Query: 64  VEYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVG 123
           V+ C+ +AAAV GD TKVK+ PLTAKERFTALQSGE+D+LSRNTTWT  RD+ +G+ F G
Sbjct: 62  VDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTG 121

Query: 124 VNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAA 183
           V YYDG GF+     G+KSAKEL+GA+VC+Q+GT TELN+ADYF+ + M Y PV FD + 
Sbjct: 122 VTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSD 181

Query: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNV 243
           +++K  ++GRCD L +DQS LYALR+ L  P   +VLPE+ISKEPLGPVVR+ DD+WF++
Sbjct: 182 ESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSI 241

Query: 244 AKWVLYAMVNAEEYGITSKNVDEMMKSD-NPEVKRILGLDGPKGTGLGIRDDWSYQIVKQ 302
            +W L+AM+NAEE GI S+NVDE   +   P++  +LG +G  G  L + + W+Y I+KQ
Sbjct: 242 VRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQ 301

Query: 303 VGNYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           VGNY E F+R VGS SPLKI RG N LWN GG  YAPP+R
Sbjct: 302 VGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341