Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., glutamate/aspartate periplasmic binding protein from Escherichia coli BL21

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 6/240 (2%)

Query: 5   LTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDV 64
           + +LA  ++A  A    +A AA STLDK+   G I  G       FS  + + +  G   
Sbjct: 8   IAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQ 67

Query: 65  EYCQAMAAAVLGDKTK----VKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLN 120
           +Y  A+  AV     K    VK +P+T++ R   LQ+G  D    +TT  ++R       
Sbjct: 68  DYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA-- 125

Query: 121 FVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFD 180
           F    +  G   + KK   +K   +L G +V V SGTT+E+ L        M  + +   
Sbjct: 126 FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAK 185

Query: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKW 240
               + +  ++GR      D + L   R   +KPD+  ++ +  S+E  G ++R+DD ++
Sbjct: 186 DHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQF 245