Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 73.6 bits (179), Expect = 6e-18
 Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 17/244 (6%)

Query: 4   KLTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGID 63
           +L+V    +   + +  L A+    TL ++     I  G     P FS     GE  G  
Sbjct: 2   RLSVFCLFLTCFAPVTPLQAADEGDTLQQIAKTAKIRIGYREAEPPFSYQLPNGEITGFS 61

Query: 64  VEYCQAMAAAVLG----DKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGL 119
            + C+A++  +      DK ++++V  T   RF  ++SG+ID+    TT   +R   +  
Sbjct: 62  TDLCRAISEDIRSKLKLDKIELEYVKATPATRFILVRSGQIDIECAATTNNSERRKIVDF 121

Query: 120 NFVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTT--ELNLADYFRNSGMTYKPV 177
           ++   N+     F+ +K   +KS  +L G SV   SGT    +LN  +  +N  ++  P 
Sbjct: 122 SY--PNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNRAKNLNISVMP- 178

Query: 178 VFDTAAQTSKGFD---AGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIIS-KEPLGPVV 233
                    + FD   AG+      D   L AL    E PD   +  E +S  EP G V 
Sbjct: 179 ----TKTNEEAFDLVVAGKASAFVMDGILLAALAATSENPDLYALSEETLSAPEPYGLVF 234

Query: 234 RQDD 237
           R++D
Sbjct: 235 RRND 238