Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  406 bits (1044), Expect = e-118
 Identities = 218/411 (53%), Positives = 278/411 (67%), Gaps = 33/411 (8%)

Query: 24  NPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIPYD 83
           +P  RS V Q+    +L + L++  +NA +NL   GIA+GF FL+  AGF ISQSL+PY+
Sbjct: 21  DPKLRSQVIQITVAVILVWLLWSFYSNAQSNLTRLGIASGFGFLDNRAGFAISQSLVPYN 80

Query: 84  ETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLP 143
           E+ SYGR FLVGLLNT LV+ LG++LAT++GFL+G+ARLS N +I  LA+ Y+E  RNLP
Sbjct: 81  ESMSYGRAFLVGLLNTLLVAFLGVILATLIGFLMGVARLSKNVVIKALASAYVEITRNLP 140

Query: 144 LLLQIFFWYFVVLQALPSARESMHLG---------------------------------E 170
            L QI FWY  VL  LP  R+S   G                                  
Sbjct: 141 PLFQIMFWYLAVLATLPGPRQSWGFGLQPLLGAIGSGLSSIGLGFLGGPLSAYAASLAAP 200

Query: 171 WFYLNIKGLYLAKPIFESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILL 230
             ++N +GL + +PIFE GS+ +L ALIA  I  ++L+ WA  R+  TG   P+    L 
Sbjct: 201 GVFVNNRGLVVPRPIFEDGSMAILYALIAAFILSFLLARWAKKRREATGHFFPVFWTSLG 260

Query: 231 LCVTFPVLVYFLLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRS 290
           L +  P+L    +G P+  E P LRGFNF GG+ V+PE  +LL+AL+IYT  FIAEIVRS
Sbjct: 261 LIIVLPLLASAAMGFPVGVEKPELRGFNFVGGLRVIPEFVSLLLALSIYTGGFIAEIVRS 320

Query: 291 GINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYP 350
           GI AVS GQTEAA SLGL    TL+LVIIPQA+R+I+PPLTSQYLNLTKNSSL +A+GYP
Sbjct: 321 GILAVSKGQTEAAHSLGLRNGPTLRLVIIPQAMRVIVPPLTSQYLNLTKNSSLGVAVGYP 380

Query: 351 DLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401
           DL +VFAGTTLNQTGQAIEII++ M VYLT+S++TSA+M  YN++VALVER
Sbjct: 381 DLFAVFAGTTLNQTGQAIEIIAIIMAVYLTISIVTSAIMGWYNKRVALVER 431