Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 47/161 (29%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 237 VLVYFLLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVS 296
           + V  + G P+  +  +   + F G +  L    A + AL+++T +++AEIVR+G+ +++
Sbjct: 159 IYVELVRGTPLLVQIFIF--YFFIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSIT 216

Query: 297 HGQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVF 356
            GQ EAA SLGL+ +++++ V++PQA + ++PPL  Q+++L K++SL   I   +L+   
Sbjct: 217 RGQNEAARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLK-S 275

Query: 357 AGTTLNQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVA 397
               +  +    EI+     +YL ++L  S + +   R++A
Sbjct: 276 GREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLA 316



 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query: 95  GLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFWYFV 154
           GL  T  +SV+  +L  I+G   G+ RLSSN  +  L+ +Y+E  R  PLL+QIF +YF 
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFF 179

Query: 155 VLQALPSARE 164
           +   L  +RE
Sbjct: 180 IGTVLNLSRE 189