Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 50/128 (39%), Positives = 79/128 (61%), Gaps = 1/128 (0%)

Query: 271 ALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPL 330
           +++V L ++TA+ + E VR+GI A+  GQ  AA ++G    +    V++PQA RIIIPPL
Sbjct: 113 SVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPL 172

Query: 331 TSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTSALMN 390
           TS++LN+ KNSS+A  IG  +L++     T   +    E  ++  L+Y TL++    LM 
Sbjct: 173 TSEFLNVFKNSSVASLIGLMELLAQ-TKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMR 231

Query: 391 LYNRKVAL 398
           L  +KVA+
Sbjct: 232 LVEKKVAV 239



 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 5/81 (6%)

Query: 92  FLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFW 151
           ++ GL  T  ++V+  ++A +LG ++G+ R   N ++S +A  Y+E FRN+PLL+Q+F W
Sbjct: 25  YIAGLGWTIAIAVVAWIIALLLGSILGVMRTVPNRIVSGIATCYVELFRNVPLLVQLFIW 84

Query: 152 YFVVLQALPSARESMHLGEWF 172
           YF+V   LP      +L +W+
Sbjct: 85  YFLVPDMLP-----QNLQDWY 100