Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 50/128 (39%), Positives = 80/128 (62%), Gaps = 1/128 (0%)

Query: 268 ELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRIII 327
           E  + ++AL +YTA+F+AE +RSGI A+   Q EA  ++G +   T++ V++PQALR+ +
Sbjct: 99  EAFSAVIALALYTAAFMAEDIRSGIRAIPTVQFEAGRAMGFSYLATMRRVVLPQALRVTV 158

Query: 328 PPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTSA 387
           PPL SQ L+L KN+S+A  IG  +L+   AG   + T ++ E  +     YLT+SL  + 
Sbjct: 159 PPLISQTLSLWKNTSIATVIGVAELM-YQAGQVESATFRSFESFAFASAAYLTVSLAITG 217

Query: 388 LMNLYNRK 395
           L   Y+ +
Sbjct: 218 LATWYHHR 225



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 85  TYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPL 144
           T  Y    + GLL +  +    ++LA  +  ++ + RLS    +  L   Y+E+ RN+PL
Sbjct: 11  TGKYHDMLVAGLLLSLQLLAAALVLALPIALVVALLRLSPFAPLRWLGFAYVESIRNIPL 70

Query: 145 LLQIFFWYFVVLQALPSARESMHLGEWFY 173
           L  + FWYF   + LP       + +W Y
Sbjct: 71  LAHMLFWYFGAPELLPEG-----IKQWLY 94