Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 28/214 (13%)

Query: 193 VLVALIAGIIACWVLSIWATNRQ--------RLTGQQTPMGRYILLLCVTFPVLVYFLLG 244
           V VAL A ++A  V SI  T R         R       + R + LL   F  + YF+L 
Sbjct: 43  VSVALTALLVALVVGSIIGTLRTLPDSPWLVRFGNAWVELFRNVPLLVQVF--IWYFVLP 100

Query: 245 QPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAM 304
           + I    P +R          LP    ++ AL  +T++ IAE +RSGI A+  GQ  A M
Sbjct: 101 KMI----PAMRD---------LPPFVLVVCALGFFTSARIAEQLRSGIQALPRGQRYAGM 147

Query: 305 SLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVF--AGTTLN 362
           ++G T  +  + V++P A RII+PPLTS+ +N+ KNSS+A A+  P+L   +  AG    
Sbjct: 148 AVGFTTPQYYRFVLLPMAYRIIMPPLTSESMNIFKNSSVAFAVSIPELTQFYLQAG---E 204

Query: 363 QTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKV 396
           +T   I I    +++Y+  ++L + +M    RKV
Sbjct: 205 ETSAQIPIYIGVVILYVISAMLINRIMTFIERKV 238



 Score = 59.7 bits (143), Expect = 9e-14
 Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 7/81 (8%)

Query: 90  RTFLVGLLN----TALVSVLGILLATILGFLIGIARL--SSNWLISRLAAVYIETFRNLP 143
           +T+L  +LN    T  V++  +L+A ++G +IG  R    S WL+ R    ++E FRN+P
Sbjct: 29  QTYLQWMLNAWGWTVSVALTALLVALVVGSIIGTLRTLPDSPWLV-RFGNAWVELFRNVP 87

Query: 144 LLLQIFFWYFVVLQALPSARE 164
           LL+Q+F WYFV+ + +P+ R+
Sbjct: 88  LLVQVFIWYFVLPKMIPAMRD 108