Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 114 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  109 bits (273), Expect = 3e-29
 Identities = 54/114 (47%), Positives = 78/114 (68%)

Query: 30  VVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIPYDETYSYG 89
           V +Q+L V ++    + +V+N + NL SR IATGF FL++ AGF I +SLI Y  + +Y 
Sbjct: 1   VAYQVLVVGLIGLLAWYLVSNTMHNLASRNIATGFGFLDREAGFAIGESLIDYTPSDTYR 60

Query: 90  RTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLP 143
           R  LVGL+NT  VS + ++ AT+LG ++GI+RLSSN +I R AA Y+   RN+P
Sbjct: 61  RAILVGLVNTLRVSAVALVFATVLGLVVGISRLSSNGVIRRAAAAYVGCVRNVP 114