Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., amino acid ABC transporter permease from Variovorax sp. OAS795

 Score = 92.8 bits (229), Expect = 9e-24
 Identities = 71/208 (34%), Positives = 111/208 (53%), Gaps = 18/208 (8%)

Query: 193 VLVALIAGIIACWVLSIWATNRQRLTGQQTP----MGRYILLLCVTFPVLVY-FLLGQPI 247
           V VAL+A I+A  + S+    R   T   +P    +G   + L    P+LV  FL    I
Sbjct: 33  VSVALLALIVALVLGSLIGIIR---TLPNSPWLVRLGNAWVELFRNIPLLVQIFLWYHVI 89

Query: 248 TAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307
            A  PV++G         +P    +++AL  +T++ IAE VRSGI A+  GQ  A M++G
Sbjct: 90  PALVPVMKG---------VPSFVLVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVG 140

Query: 308 LTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367
            T  +  + VI+P A RIIIPPLTS+ +N+ KNSS+A A+   +L ++FA     +T + 
Sbjct: 141 FTTPQYYRYVILPMAYRIIIPPLTSETMNIFKNSSVAFAVSVTEL-TMFAMQAQEETSRG 199

Query: 368 IEIISMTMLVYLTLSLLTSALMNLYNRK 395
           IE+      +Y+  +   + +M    +K
Sbjct: 200 IEVYLAVTALYVISAFAINRIMAYIEKK 227



 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 3/64 (4%)

Query: 99  TALVSVLGILLATILGFLIGIARLSSN--WLISRLAAVYIETFRNLPLLLQIFFWYFVVL 156
           T  V++L +++A +LG LIGI R   N  WL+ RL   ++E FRN+PLL+QIF WY V+ 
Sbjct: 32  TVSVALLALIVALVLGSLIGIIRTLPNSPWLV-RLGNAWVELFRNIPLLVQIFLWYHVIP 90

Query: 157 QALP 160
             +P
Sbjct: 91  ALVP 94